Hello
I have a question regarding the analyze mode command in ptraj
I have done a normal mode analysis with nmode and dumped the normal
modes to a file. I then analyzed the modes with ptraj using
trajin lac.pdb
analyze modes displ file vecs end 6690 out ptraj.out
where vecs are the file from nmode.
My question is: what are the units of the displacements in the output file?
Best regards,
Samuel
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Received on Tue Apr 06 2010 - 03:00:02 PDT
