Re: [AMBER] problem with frcmod parameter

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Fri, 2 Apr 2010 10:03:37 -0700 (PDT)

> When running parmchk to get .frcmod of my .prep, I have got two IMPROPERs,
> c2-c3-nh-hn 1.1 180.0 2.0 Using default valu
e
> c2-c2-na-n2 1.1 180.0 2.0 Using default valu
e
>
> which is different from gaff.dat:
> X -c3-nh-X 6 0.000 0.000 2.000 JCC,7,(1986),230
> X -c2-na-X 4 2.500 180.000 2.000

Are you sure you are comparing impropers to impropers? The different
format of the lines makes me wonder.

Bill

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Apr 02 2010 - 10:30:02 PDT
Custom Search