[AMBER] how to convert to standard Amber PDB input

From: geyan <geyan.big.ac.cn>
Date: Tue, 30 Mar 2010 11:26:17 +0800

 Hello everyone.
    Have anybody met this before?
 I construct a PDB file of a DNA-Protein complex,with three molecular protein and one molecular DNA. But the Atom numbers and residue numbers are not consecutive,which is seperated by the mark "MODEL".But from many Amber examples,I found that these two items are consecutive. SO how can I convert this irregular format to the standard one?Will this affect the Amber computaion?
  Any suggestions will be appreciated.


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Received on Mon Mar 29 2010 - 20:30:04 PDT
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