Re: [AMBER] ATP charge convergence

From: Eric Pettersen <pett.cgl.ucsf.edu>
Date: Thu, 18 Mar 2010 17:11:18 -0700

Hmm, I don't see the attachments that were in the mail I sent. Is
there some magic to avoid having them stripped?

--Eric

On Mar 18, 2010, at 5:07 PM, Eric Pettersen wrote:

> Hi,
> I cannot get sqm to produce SCF convergence for an ATP derived from
> PDB 1xfa, even with the convergence criteria cranked way down. Is
> it because of the high charge (-4)? Is there anything that can be
> done to get it to converge? I've attached the sqm.in file (with the
> lowered criteria), sqm.out file, and the mol2 file that was fed to
> Antechamber originally. The sqm command line I used was the same as
> antechamber uses: sqm -O -i sqm.in -o sqm.out.
>
> --Eric
>
> Eric Pettersen
> UCSF Computer Graphics Lab
> http://www.cgl.ucsf.edu
>
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber


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Received on Thu Mar 18 2010 - 17:30:03 PDT
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