[AMBER] Amber, CASP again

From: Shaandar Nyamtulga <nyam100.hotmail.com>
Date: Thu, 4 Mar 2010 08:52:20 +0000

 I apologise for my vague question. I am planning to attend in CASP, even though I am novice to protein structure prediction. In which part of protein structure prediction I can use Amber? Within the limit of my knowledge, I am planning to compare the target protein sequence wth others using blast, and find some proteins which have similar parts (domains, motifs,..I guess), copy and paste those similar parts's structures and combine and edit (restructure) them in Pymol. I would really appreciate if someone would give me detailed guidance.

Thank you


Nyamtulga Shaandar, M.Sc


Informatics Institute,

Mongolian Science Academy,


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Received on Thu Mar 04 2010 - 01:00:03 PST
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