use the DSSP command in ptraj. check the archives for details.
On Wed, Feb 24, 2010 at 3:56 AM, Mannan <malie_03.yahoo.co.in> wrote:
> Hi,
> I would like to print out the % helicity of a peptide in an implicit
> simulation.
> I could visualise in VMD timeline.
> But I would like to see it in numbers.
> How do I get in amber/VMD/sirius
>
> Thanks in advance
>
> Mannan
>
>
>
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Received on Wed Feb 24 2010 - 05:00:02 PST
