Re: [AMBER] AmberTools1.3 installation error

From: Anna Dejardin <anna.dejardin.ucl.ac.uk>
Date: Wed, 24 Feb 2010 10:38:26 +0000

Hi Bill,

I have read, write and execute permissions on

/homes/acd/amber11/bin

I tried the installation again by changing

cp -p $(TARGET) $(BINDIR)

to

-cp -p $(TARGET) $(BINDIR)

in /amber11/src/gleap/leapsrc

and AmberTools installs now. It says it is just ignoring the errors that
come up. Will my having done that cause any problems in using the
program later?

Thanks!

Anna


Bill Ross wrote:
>> cp -p sleap /homes/acd/amber11/bin
>>
>
> What are the permissions on this dir:
>
> $ ls -ld /homes/acd/amber11/bin
>
> Assuming it's owned by you, it should start with something like drwx,
> which means:
>
> d=directory
> r=read permission
> w=write permission
> x=execute permission (for directories this means permission to go there)
>
> If it's not owned by you, things are more complicated and it may
> be appropriate to find local help from someone who knows what user
> group membership is like on this machine.
>
> Bill
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>


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Received on Wed Feb 24 2010 - 03:00:03 PST
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