I used AmberTools 1.2 and Amber10
The bugfixes is down loaded here:
http://ambermd.org/bugfixes.html 10.0 bugfixes for amber10
http://ambermd.org/bugfixesat.html Version 1.2 for ambertools
Is it because of version conflict?
--- 10年2月4日，周四, Ray Luo <ray.luo.uci.edu> 写道：
发件人: Ray Luo <ray.luo.uci.edu>
主题: Re: [AMBER] failure when doing bugfix patch for amber10 and tools V1.2
收件人: "AMBER Mailing List" <amber.ambermd.org>
日期: 2010年2月4日,周四,上午2:03
Are you sure you are applying the correct bugfix? Which version of AmberTools are you trying to patch?
All the best,
Ray
==========================================
Ray Luo, Ph.D.
Associate Professor in Computational
Biochemistry and Molecular Biophysics
Dept of Molecular Biology and Biochemistry Dept of Biomedical Engineering
University of California, Irvine, CA 92697-3900
Email: rluo.uci.edu Phones: (949) 824-9528, 9562
Web: http://rayl0.bio.uci.edu/rayl/
==========================================
xueqin pang wrote:
> Hello everyone,
> When running mmpbsa I get the error no data for 0+2 MM bond 200.
> According to Jason 's suggestion I checked the patches and amber bugfixes failed here:
> patching file src/pmemd/src/prmtop_dat.fpp
> Hunk #1 FAILED at 1156.
> 1 out of 1 hunk FAILED -- saving rejects to file src/pmemd/src/prmtop_dat.fpp.rej
> patching file src/mm_pbsa/mm_pbsa_createinput.pm
> Hunk #1 FAILED at 580.
> 1 out of 1 hunk FAILED -- saving rejects to file src/mm_pbsa/mm_pbsa_createinput.pm.rej
> Abertools patch failed here:
> patching file src/ptraj/trajectory.h
> Hunk #1 FAILED at 107.
> 1 out of 1 hunk FAILED -- saving rejects to file src/ptraj/trajectory.h.rej
> Do you have any ideas to fix it ?
> Thanks
> Xueqin
>
>
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Received on Thu Feb 04 2010 - 18:00:02 PST
