Hello,
On Mon, Feb 1, 2010 at 3:41 PM, s. Bill <s_bill36.yahoo.co.uk> wrote:
>
> Dear AMBER
> Thanks for your help.
> by commeting the lines, I found other errors in each of the following commands:
> cd rdc && ./Run.dip
> cd noesy && ./Run.noesy
> cd jar && ./Run.jar
> Also, I found there is no errors in QMMM serial.
> But during Parralel test, it stopped in PheMTI and most of the next commands, giving that:
>
> This test must be run in parallel
DO_PARALLEL is not properly set (see below)
> make: *** [test.sander.TI] Error 1
>
> I have installed lamsource (implemeted in AMBER), using the following commands:
> cd $AMBERHOME/src
> make clean
> ./configure_amber -lamsource pgf90
> ./configure_lam
> make parallel
>
> cd $AMBERHOME/test
> set DO_PARALLEL ’mpirun -np 4’
If you're using tcsh, csh, or any other cshell variant, you need to
use "setenv DO_PARALLEL 'mpirun -np 4' ", since 'set' sets only a
local variable.
> make test.parallel.MM < /dev/null
>
> So, could you help me please to figure out what the problem is?
> TEST_FAILURES.diff is attached.
> Thanks in advance
> S. Bill
Good luck!
Jason
--
---------------------------------------
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-4032
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Received on Mon Feb 01 2010 - 13:30:03 PST
