dear everyone:
I use ptraj to analyze hbond, but I can't understand the mannual fully, my script is as follows, but it doesn't work, maybe I made a mistake, thank you for your help.
trajin nptmrna1.dcd 1 600 50
donor :70.OG print
acceptor :115.N6 :115.1H6 print
hbond donor :70.OG acceptor :115.N6 print series hbond
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Received on Thu Dec 31 2009 - 01:00:03 PST
