is it possible to try amber10? amber9 is quite old by now. I looked at
amber10 addles and the default sizes should be plenty for your system.
if you can't try amber10, email me the input prmtop and crd file and I will
try it.
On Wed, Dec 23, 2009 at 11:04 AM, balaji nagarajan <balaji_sethu.hotmail.com
> wrote:
>
> dear amber !
>
>
> I have a two different DNA structures of 20 base pairs ,
> I would like to do NEB , I have already posted the error
> of segmentation fault regarding this ,
>
> It has totaly 1260 atoms , I have edited the SIZE.h file as said in earlier
> mails ,
> Now the addles.in is running without any error for 4 copies
> I was not able to do more than that , if i do more than 4 copies it is
> saying the same error (segmentation fault )
>
> I have attached all the files,
> I would like to generate more copies ,
> could any one help me regarding this
>
> thanks in advance !
>
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Received on Wed Dec 23 2009 - 08:30:04 PST
