RE: [AMBER] addles - neb error

From: balaji nagarajan <balaji_sethu.hotmail.com>
Date: Thu, 17 Dec 2009 08:50:22 +0530

Dear Amber !

I am still having problem in generating the neb.prmtop and neb.inpcrd files ,
I went to AMBERHOME/src/addles/SIZE.h
and i changed the values of
MAXBND , MAXANG , MAXDIH,

as said in the previous posts in archive

i did make clean
and recompiled , as make
when i run till i get the same error !

what else have to be done

I would like to know is it possible to do it for the system I have
chosen .

thanks in advance

regards
balaji

> Date: Wed, 16 Dec 2009 16:01:20 -0500
> From: case.biomaps.rutgers.edu
> To: amber.ambermd.org
> Subject: Re: [AMBER] addles - neb error
>
> On Wed, Dec 16, 2009, balaji nagarajan wrote:
>
> > I am using amber 9 ,
> >
> > here with i have set the input and output files ,
> > I dont know what the error is ,
>
> The end of the addles output is this:
>
> finished creating LES subspace
> Checking topology sizes against compiled limits
> exceeded MAXANG in SIZE.BLOCK.
> MAXANG = 8000
> ntheta = 8328
> Change SIZE.BLOCK and recompile.
>
> Did you try what is suggested above?
>
> (Maybe people with more experience with addles or neb can chime in here...)
>
> ...dac
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
                                               
_________________________________________________________________
Windows 7: Simplify what you do everyday. Find the right PC for you.
http://windows.microsoft.com/shop_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Dec 16 2009 - 19:30:04 PST
Custom Search