Dear Amber Users,
I am trying to get Hbond analysis using ptraj of an MD run. Since the
protein is large, the memory needed was huge. So, I am trying to call
subsets of atoms to reduce memory requirement. It looks like the run is
going to completion successfully, but the output does not show any Hbonds. I
am attaching the input and output files. Help is greatly appreciated. Thank
you.
Jaya.
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Received on Tue Nov 24 2009 - 09:00:03 PST
