Dear John,
> I am trying to simulate a protein with a threonine residue that is
> phosphorylated on its side chain oxygen atom. Can someone direct me to
> an Amber parameter set for creating this residue?
See
http://www.pharmacy.manchester.ac.uk/bryce/amber#pro
Homeyer et al. J. Mol. Model. 2006, 12, 281.
regards, Francois
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Received on Tue Nov 03 2009 - 12:00:02 PST