Sorry to disturb you people again. I just want to do a simulation of protein
a different pH values. A similar problem is done the following paper
Molecular dynamics simulations of the native
and partially folded states of ubiquitin: Influence
of methanol cosolvent, pH, and temperature
on the protein structure and dynamics
Protein Science (2007), 16:1101–1118
The pH simulation in the above paper is done by GROMOS96. Can the problem be
done with AMBER. In short I want to simulate my protein in explicit solvent
at different different pH values. What should I do? Please help.
On Sat, Oct 10, 2009 at 12:07 AM, nicholus bhattacharjee <
nicholusbhattacharjee.gmail.com> wrote:
> Thanx a lot dear Jason and Carlos.
>
--
Nicholus Bhattacharjee
PhD Scholar
Department of Chemistry
University of Delhi
Delhi-110007 (INDIA)
Phone: 9873098743(M)
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Received on Tue Nov 03 2009 - 00:00:02 PST
