Hello!
Sander.MPI tasks are crushing just after launch since mvapich software was
upgraded on cluster.
Sander.MPI.out contains:
MPI process terminated unexpectedly
Exit code -5 signaled from node-23-06
Killing remote processes...forrtl: error (69): process interrupted (SIGINT)
Image PC Routine Line
Source
libpthread.so.0 00007F2132C1EB00 Unknown Unknown Unknown
libpthread.so.0 00007F2132C1DB7E Unknown Unknown Unknown
libmpich.so.1.0 00007F21334CB1AC Unknown Unknown Unknown
libmpich.so.1.0 00007F21334E1ADE Unknown Unknown Unknown
libmpich.so.1.0 00007F21334C050A Unknown Unknown Unknown
libmpich.so.1.0 00007F21334A2DED Unknown Unknown Unknown
libmpich.so.1.0 00007F21334A1DC6 Unknown Unknown Unknown
sander.MPI 000000000093A0EF Unknown Unknown Unknown
sander.MPI 00000000004BC222 Unknown Unknown Unknown
sander.MPI 000000000041E05C Unknown Unknown Unknown
libc.so.6 00007F213216ACF4 Unknown Unknown Unknown
sander.MPI 000000000041DF69 Unknown Unknown Unknown
forrtl: error (69): process interrupted (SIGINT)
and so on..
I've found similar problem at
http://archive.ambermd.org/200907/0092.html, that seems to be still
unsolved.
I don't think it's infiniband problem. So what i have to do?
Thanks a lot!
Dmitri Nilov,
Lomonosov Moscow State University
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Received on Mon Nov 02 2009 - 01:30:03 PST
