Re: [AMBER] minimization error

From: case <case.biomaps.rutgers.edu>
Date: Fri, 2 Oct 2009 08:00:52 -0400

On Fri, Oct 02, 2009, balaji nagarajan wrote:
>
> I have build a model for DNA junction.
>
> 2) when i do the minimization in vaccum it
> sander got stoped and it gave the following error
>
> ----------------------------------------------------------
> At line 1262 of file _ew_box.f
> Fortran runtime error: Bad value during integer read

Look at your input file: my guess is that you have an incorrect value for ntb;
note that the default value is 1.

Also, are you sure you want to doing a vacuum minimization for a DNA junction?

...dac


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Received on Fri Oct 02 2009 - 05:30:02 PDT
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