Dear amber users
I would like to analysis my trajectory file for the change in the
total number of hydrogen bonds in my peptide and peptide with ligand
which is having beta sheet secondary structure in MD simulation. Is it
possible to do it using ptraj? Could anyone provide me a script for
this kind of analysis?
Thank you
With regards
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Aug 19 2009 - 23:12:55 PDT
