On Mar 23, 2009, at 9:05 AM, Karl Kirschner wrote: > Hi, > > I have just tried sleap, and obtained the following error message: > > "Error: prep format, sort by first column no longer supported" > > My environmental variables are set to my local ambertools copy, and > I changed > leaprc.ff99 to leaprc.ff03. I also check the bugfix page and did not > see > anything that pertrains to the above error message. I am pretty sure > that the > installation of ambertools was done correctly. > > These prep files were originally outputted by xleap, with minor > changes made > to the charge column. > > Cheers, > Karl > > On Monday 23 March 2009 14:16, David A. Case wrote: >> On Mon, Mar 23, 2009, Karl Kirschner wrote: >>> I am having some trouble with the chirality of a nonstandard >>> reside that I made.... >> >> One good thing to do would be to download AmberTools1.2, and see if >> the >> problem persists with sleap. Wei is working with Matt and Lachele at >> UGA to try to make the new codes do the right thing here. >> >> Of course, this doesn't fix tleap, but I'm not sure who will have the >> time or energy to do that. >> >> ...dac >> >> >> _______________________________________________ >> AMBER mailing list >> AMBER@ambermd.org >> http://lists.ambermd.org/mailman/listinfo/amber > > _______________________________________________ > AMBER mailing list > AMBER@ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber