Thank you Carlos Simmerling, i am using amber10 in linux ,
the order is:
$AMBERHOME/exe/sander -O -i nan.in -o nan.out -p nan.prmtop -c nan.inpcrd -r nan.rst -ref nan.inpcrd
The input and output files are in the attachment .
Thank you very much.
Nancy
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Mar 18 2009 - 01:13:00 PDT