Hi,
Thanks now the nab/ compiles just fine but when area is fixed the next is
broken ;-) when I execute the command
make -f Makefile_at
the problem is then moved to nss/ which gives the following error
(cd nss && make install )
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/bin/nab -o matgen matgen.o
libsym.a
Undefined first referenced
symbol in file
__mt_WorkSharing_rtc_
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/libnab.a(sff.o)
__mt_int_reduc_
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/libnab.a(nblist.o)
__mt_get_next_chunk_invoke_mfunc_once_int_
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/libnab.a(sff.o)
omp_get_thread_num
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/libnab.a(sff.o)
__mt_barrier_rtc_
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/libnab.a(sff.o)
omp_get_num_threads
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/libnab.a(sff.o)
omp_get_max_threads
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/libnab.a(sff.o)
__mt_get_next_chunk_invoke_mfunc_once_uint_
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/f2c.a(open.o)
__mt_double_reduc_
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/libnab.a(sff.o)
__mt_MasterFunction_rtc_
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/lib/libnab.a(sff.o)
ld: fatal: Symbol referencing errors. No output written to matgen
cc failed!
*** Error code 1
make: Fatal error: Command failed for target `matgen'
Current working directory
/xbar/nas1/gappl/gappl/ggamess/amber10/amber10/src/nss
*** Error code 1
make: Fatal error: Command failed for target `install'
On Mon, Mar 16, 2009 at 3:27 PM, David A. Case <case.biomaps.rutgers.edu>wrote:
> On Mon, Mar 16, 2009, Per Jr. Greisen wrote:
>
> > cc -c -O -DSUN -DSYSV -DBINTRAJ -xopenmp=parallel -xautopar -DOPENMP
> -Dlex
> > sff.c
> > "lex.mm_options.c", line 75: non-constant initializer: op "NAME"
>
> Looks like you have to make the same change to lex.mm_options.c that you
> made to lex.dg_options.c.
>
> ...dac
>
>
> _______________________________________________
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Wed Mar 18 2009 - 01:09:19 PDT
