There are more than just the dielectric constant ... you need to find
the right nonpolar solvation parameters and the solvent probe radius
as well. Maybe someone else on the list can make some good suggestion
on this.
Ray
On Wed, Mar 4, 2009 at 3:55 AM, SAFAK OZHAN <safak_ozhan.hotmail.com> wrote:
>
>
>
>
> Dear all,
>
> I use AMBER 9. I was wondering if it would be possible to run MMPBSA (amber9 or amber10) in chloroform environment
> by setting EXDI to 4.9 under .PB in MMPBSA input.
>
> Thanks in advance,
>
>
> Safak
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Received on Fri Mar 06 2009 - 01:11:53 PST
