Re: AMBER: top and crd files without hydrogen

From: Carlos Simmerling <carlos.simmerling.gmail.com>
Date: Tue, 16 Sep 2008 06:04:36 -0400

youwould need to use a united atom force field, but even these usually
have the polar hydrogens. do you want to do simulations without any
hydrogen, or just get the files?

On Tue, Sep 16, 2008 at 5:18 AM, Waqas Nasir <nasirwaqas1983.yahoo.com> wrote:
> Hi,
>
> Is there anyway that one could generate top and crd files without hydrogen
> atoms, i.e. after stripping off hydrogens.
>
> Thanks,
> Waqas.
>
>
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
      to majordomo.scripps.edu
Received on Wed Sep 17 2008 - 03:09:44 PDT
Custom Search