AMBER: Help...which commands in ptraj does clustering by RMSD?

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From: Jose Borreguero <borreguero.gmail.com>
Date: Thu, 11 Sep 2008 16:28:49 -0400

Dear Amber users,
I am reading the Amber9 manual and I can't find the ptraj command to cluster
the frames in a trajectory by mutual RMSD. Can anyone please tell me what is
the command?
Many thanks

-- 
Jose M. Borreguero
Postdoctoral Associate
Oak Ridge National Laboratory
P.O. Box 2008, M.S. 6164
Oak Ridge, TN 37831
phone: 865-241-3071 fax: 865-576-5491
Email: borreguerojm.ornl.gov
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Received on Fri Sep 12 2008 - 03:08:01 PDT