AMBER: periodic bondary condition

From: WANG,YING <wangying.ufl.edu>
Date: Fri, 23 May 2008 21:16:34 -0400 (EDT)

Hi, Dear Ambers,

I solvate my specimen in explicit water, like TIP3P box. I let the
buffer to be 8 angstrom. If I want to let some of the covalent
bond across the periodic boundary condition, could anybody tell me
how to acchieve it? Thanks very much in advance!!



Best,


Ying


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Received on Sun May 25 2008 - 06:08:02 PDT
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