AMBER: MM_PBSA problem in binding_energy

From: <mori.cerm.unifi.it>
Date: Wed, 14 May 2008 16:17:40 +0200

Dear Amber Users,
I'm trying to apply MM_PBSA methods according to the tutorial written by
Ross Walker for a system similar to the ras-raf of the tutorial.
after extracting coordinates, I run mm_pbsa.pl using as input file the
one showed in the tutorial adapted to my system.
I always got the same error in pbsa_com.2.out:

PB bomb in pb_setgrid(): Allocation aborted 0 0 0

Anyone can help me?
thanks in advance


mattia 

-- 
**-**-**-**-**-**-**-**-**-**-**-**-**
 
Mattia Mori, PhD Student
CERM - Centro di Risonanze Magnetiche
via L. Sacconi 6,,
50019 Sesto Fiorentino, FI
fax (+39) 055 4573914
tel (+39) 055 4573912
www.cerm.unifi.it
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
      to majordomo.scripps.edu
Received on Sun May 18 2008 - 06:07:09 PDT
Custom Search