i would like to draw Sulfo-SMCC (Sulfosuccinimidyl
4-[N-maleimidomethyl]cyclohexane-1-carboxylate)
I am using AMBER9, it is easy to create a molecule SMCC and draw it
using edit. but i don't know the atom types (e.g. CT, OS, NC, CB, etc)
where can i get those definitions so i can set the atom types using
-edit-edit selected atoms.
i hope i am on the right track.
I cannot save the molecule without setting the atom type.
Thank you,
Taufik
P.S. i read appendix C in AMBER7 manual it contained more information
that needed, my problem -i think- is smaller, as the the atom types in
SMCC must already exist in the leaprc.ff03 force field
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Received on Sun May 11 2008 - 06:07:19 PDT
