AMBER: nmode

From: <jacopo.sgrignani.unifi.it>
Date: Mon, 21 Apr 2008 18:38:44 +0100 (MET)

Hi,
i would like to perform an entropy extimation on a system aroud 7500
atom, but I usually get same different errors.
My ws has 8GB of RAM, the first time I tought that i Had to better
minimize my protein but also with a more expensive minimization (10000
cycles and 0.00001 RMS) I can only get segmentation fault error in the
ws with 8GB of RAM, and ASSERTion ' ier == 0 ' failed in nmode.f at
line 106, in another ws with 4GB of ram.
Are the other softwares to perfrom this type of calculations ? Or same
news in AMBER10?

Thanks a lot

Jacopo
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Received on Wed Apr 23 2008 - 06:07:31 PDT
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