Re: AMBER: meet problems in adding ions and waterbox

From: Qiang Li <hi_liqiang.yahoo.com>
Date: Tue, 1 Apr 2008 23:12:13 -0700 (PDT)

Are you saying that we can't use PGC for all amber versions? We are also doing some hydrodynamic simulation. My professor wrote the program and he said gcc is not good for our program.

Thank you.


----- Original Message ----
From: David A. Case <case.scripps.edu>
To: amber.scripps.edu
Sent: Tuesday, April 1, 2008 10:22:52 PM
Subject: Re: AMBER: meet problems in adding ions and waterbox

On Tue, Apr 01, 2008, Qiang Li wrote:

> Sorry, I wasn't meantioned my hardware and amber version last time. We are
> using AMD opteron, and we compile Amber 8 on Redhat Linux Enterprise 4 using
> Portland Group compilers. Is that a problem? We can not use g95 or gcc
> because some of our programs need a AMD opteron.

The Portland Group C compiler is almost certainly the "problem". It is not
clear why you cannot use gcc, however.

...dac

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Received on Fri Apr 18 2008 - 21:16:04 PDT
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