RE: AMBER: (no subject)

From: Ibrahim Moustafa <I.moustafa.psu.edu>
Date: Fri, 22 Feb 2008 11:29:59 -0500

Hi syed,

 

  You can use chimera program to check for any clash in your initial
structure and do the manual adjustment if needed.

Once you get a reasonable initial geometry you can carry on your simulation.

 

Good luck,

  Ibrahim

 

From: owner-amber.scripps.edu [mailto:owner-amber.scripps.edu] On Behalf Of
Syed Tarique Moin
Sent: Friday, February 22, 2008 1:11 AM
To: amber.scripps.edu
Subject: AMBER: (no subject)

 

Hello,

 

I am trying to minimize a complex, but i was stuck by the linmin error. I am
attaching output file of minimization.

 

Thanks in advance

 

Regards

  

  _____

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Received on Sun Feb 24 2008 - 06:07:42 PST
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