Re: AMBER: RE: FF94 or FF99?

From: David A. Case <>
Date: Fri, 23 Nov 2007 10:51:18 -0800

On Thu, Nov 22, 2007, Ilyas Yildirim wrote:

> Just wanted to comment on the current force field's single strand
> predictions. We have done some explicit solvent simulations on single
> strand RNAs and saw that the current force field (amber99) is not doing
> any good predictions.

Just curious: what are the bad predictions? How do you know what the right
answer is, and are you sure that your calculations are converged?


The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Sun Nov 25 2007 - 06:07:40 PST
Custom Search