Mattia,
You need to use "crdbox" as file type ...
vlad
Mattia Mori - CERM wrote:
> Dear all,
> when I try to visualize trajectory in VMD programs I got great results
> only when I impose in my sander input file ntb=0.
> When I use ntb=2 and I load prmtop and mdcrd in VMD, I get a disaster
> and it's not possible to recognize any molecule in the animation,
> every bond is stretched to several amstrong.
> How can I visualize trajectory when I impose ntb=2?
> There are others useful visualization programs?
>
> Thanks in advance for your help.
>
> Mattia Mori
>
>--
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>**-**-**-**-**-**-**-**-**-**-**-**-**
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>Mattia Mori, PhD Student
>CERM - Centro di Risonanze Magnetiche
>via L. Sacconi 6,,
>50019 Sesto Fiorentino, FI
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>tel (+39) 055 4573912
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Received on Sun Nov 04 2007 - 06:07:07 PST
