Dear amber experts
I am trying to install amber9 in xeon dual processor 64_machine using lam program. Serial version of amber9 compiled. When I am
trying to compile the parallel version i am getting the following error.
##########################################
qm_div.o force.o \
../lmod/lmod.a ../lapack/lapack.a ../blas/blas.a \
../lib/nxtsec.o ../lib/sys.a -L/programs/lam/lib -L/programs/lam/lib -llammpio -llamf77mpi -lmpi -llam -laio -laio -lutil -ldl -lpthread -L/opt/intel/mkl/8.0.1/lib/em64t -lvml -lmkl_lapack -lmkl -lguide -lpthread
evb_init.o(.text+0x650): In function `evb_init_':
_evb_init.f: undefined reference to `mpi_bcast_'
evb_init.o(.text+0x6a5):_evb_init.f: undefined reference to `mpi_bcast_'
evb_init.o(.text+0x1128):_evb_init.f: undefined reference to `mpi_bcast_'
evb_init.o(.text+0x16bb):_evb_init.f: undefined reference to `mpi_bcast_'
evb_init.o(.text+0x1f20):_evb_init.f: undefined reference to `mpi_bcast_'
evb_init.o(.text+0x22c9):_evb_init.f: more undefined references to `mpi_bcast_' follow
qmmm_module.o(.text+0x219c): In function `qmmm_module_mp_qmmm_mpi_setup_.L':
_qmmm_module.f: undefined reference to `mpi_recv_'
qmmm_module.o(.text+0x239d):_qmmm_module.f: undefined reference to `mpi_send_'
qmmm_module.o(.text+0x262f):_qmmm_module.f: undefined reference to `mpi_recv_'
qmmm_module.o(.text+0x2825):_qmmm_module.f: undefined reference to `mpi_send_'
qmmm_module.o(.text+0x2c95): In function `qmmm_module_mp_qmmm_mpi_setup_.A':
_qmmm_module.f: undefined reference to `mpi_bcast_'
qmmm_module.o(.text+0x2cbc):_qmmm_module.f: undefined reference to `mpi_bcast_'
qmmm_module.o(.text+0x2ce3):_qmmm_module.f: undefined reference to `mpi_bcast_'
qmmm_module.o(.text+0x2d0a):_qmmm_module.f: undefined reference to `mpi_bcast_'
qmmm_module.o(.text+0x2d31):_qmmm_module.f: undefined reference to `mpi_bcast_'
qmmm_module.o(.text+0x2d58):_qmmm_module.f: more undefined references to `mpi_bcast_' follow
qmmm_module.o(.text+0x4db8): In function `qmmm_module_mp_qmmm_mpi_setup_.A':
_qmmm_module.f: undefined reference to `mpi_recv_'
.
.
.
.
.
force.o(.text+0x1d07):_force.f: undefined reference to `mpi_allgather_'
force.o(.text+0x1d40):_force.f: undefined reference to `mpi_allgather_'
force.o(.text+0x2ca4):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x2cea):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x2d12):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x2d39):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x2d7c):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x2da4):_force.f: more undefined references to `mpi_bcast_' followforce.o(.text+0x4aeb): In function `force_.A':
_force.f: undefined reference to `mpi_allgather_'
force.o(.text+0x4b24):_force.f: undefined reference to `mpi_allgather_'
force.o(.text+0x5a88):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x5ace):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x5af6):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x5b1d):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x5b60):_force.f: undefined reference to `mpi_bcast_'
force.o(.text+0x5b88):_force.f:
more undefined references to `mpi_bcast_' follow
make[1]: *** [sander.MPI] Error 1
make[1]: Leaving directory `/programs/amber9/src/sander'
make: *** [parallel] Error 2
##################################
Therefore I am looking for a help
from amber experts.
Thank you
Majid
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Received on Wed Oct 17 2007 - 06:07:41 PDT
