AMBER: fragment parametrization tutorial?

From: Miguel Ortiz-Lombardía <ibdeno.gmail.com>
Date: Sat, 29 Sep 2007 20:53:05 +0200

Dear amber users,

I want to carry out binding free energy calculations for a system where one
protein contains a non-standard residue, N(6)-acetyl-lysine. Since I haven't
been able to locate parameters for such residue, I'd like to try and
generate them myself. Being quite new to AMBER, I'd appreciate if someone
could point me to a tutorial for this kind of procedure within AMBER.

Thanking you in advance for your help,


Miguel 
-- 
correo-e: ibdeno.gmail.com
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Je suis de la mauvaise herbe,
Braves gens, braves gens,
Je pousse en liberté
Dans les jardins mal fréquentés!
Georges Brassens
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Received on Sun Sep 30 2007 - 06:07:55 PDT
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