Hi developers and users of Amber9,
I am a newbie to amber. I trying to install it in my MacPro with XEON Quad
core processor. I issued the following configuration command,
./configure ifort_x86_64
I changed all the gcc to icc and cpp to icpc.
I have MKL_HOME set and AMBERHOME environmental variable set properly.
When I issue the make command I am strucking with the following,
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make[2]: `nxtsec.o' is up to date.
ifort -o new_crd_to_dyn new_crd_to_dyn.o ../lib/nxtsec.o
-L/Library/Frameworks/Intel_MKL.framework/Versions/9.1.026//lib/em64t -lvml
-lmkl_lapack -lmkl -lguide -lpthread
cpp -traditional -P -DMKL new_to_old_crd.f90 > new_to_old_crd.f
ifort -c -w95 -mp1 -ip -O3 -FR -o new_to_old_crd.o new_to_old_crd.f
ifort -o new_to_old_crd new_to_old_crd.o ../lib/nxtsec.o
-L/Library/Frameworks/Intel_MKL.framework/Versions/9.1.026//lib/em64t -lvml
-lmkl_lapack -lmkl -lguide -lpthread
mv amoeba_parm new_crd_to_dyn new_to_old_crd ../../exe
cp README_EXE ../exe/README
cd leap; make install
Compiling basic programs
cd src/Wc; make
Makefile:10: warning: overriding commands for target `.c.o'
../../../config.h:86: warning: ignoring old commands for target `.c.o'
icc -c -I/usr/X11R6/include -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -m64
-O2 -o MapAg.o MapAg.c
icc -c -I/usr/X11R6/include -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -m64
-O2 -o WcActCB.o WcActCB.c
WcActCB.c(22): catastrophic error: could not open source file
"X11/IntrinsicP.h"
#include <X11/IntrinsicP.h>
^
compilation aborted for WcActCB.c (code 4)
make[2]: *** [WcActCB.o] Error 4
make[1]: *** [install] Error 2
make: *** [serial] Error 2
localhost:/usr/local/amber/amber9/src biotechdcf$
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I have attached my config.h file as well. I would welcome any help on this?
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Received on Mon Sep 24 2007 - 17:45:22 PDT
