AMBER: about MD outputs

From: <>
Date: Sun, 23 Sep 2007 13:57:33 +0200 (CEST)

I'm just running my first MD on a 500ps timescale
I'm concerned about this output:



| Flags:
 getting new box info from bottom of inpcrd
| INFO: Old style inpcrd file read

| peek_ewald_inpcrd: Box info not found in inpcrd
|Largest sphere to fit in unit cell has radius = 0.000

This is the only file produced in 24h calculation.

I run the following:
/prog/amber9/exe/sander -O -i -o MNK1.dinamica.out -p -c MNK.system.rst -r MNK1.sys.din.rst -x MNK1.sys.din.crd

There is come bug??

Many thanks

Dr Edoardo Saccenti
CERM Magnetic Resonance Center
University of Florence
Fiorgen Foundation
Via Luigi Sacconi n 6
50019 Sesto Fiorentino
(FI) Italy
Tel: +39 055 4574281
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Mon Sep 24 2007 - 17:45:00 PDT
Custom Search