Hello,
I knew the problem. It is due to the format of my
7-col.dist.
Have a nice weekend to every Amber users.
Wenyong.McGill
--- Wenyong Tong <wenyong_tong.yahoo.com> wrote:
>
> Hello, David
>
> Thanks, I see and will try it. I have another
> question.
>
> Part of my 7-col file is as follows: UNK is a
> modified residue.
>
> 7 UNK 1H1 7 UNK H10 2.1
> 7 UNK 1H1 7 UNK H7 2.5
> 7 UNK 1H1 7 UNK H8 2.7
> 7 UNK 1H1 7 UNK H9 2.1
> 7 UNK H 7 UNK H10 2.7
> 7 UNK H 7 UNK H7 2.5
> 7 UNK H 7 UNK H9 3.2
>
> However, when I use “ makeDIST_RST “ with my
> modified
> MAP files to get RST files, I only got one “&rst” at
> the end of the file. The result is as follows:
> #
> # 7 UNK 1H1 7 UNK H10 2.1
> 7 UNK 1H1 7 UNK H7 2.5
> 7 UNK 1H1 7 UNK H8 2.7
> 7 UNK 1H1 7 UNK H9 2.1
> 7 UNK H 7 UNK H10 2.7
> 7 UNK H 7 UNK H7 2.5
> 7 UNK H 7 UNK H9 3.2
> &rst
> ixpk= 0, nxpk= 0, iat= 149, 152, r1= 1.30, r2=
> 1.80,
> r3= 2.10, r4= 2.60,
> rk2=20.0, rk3=20.0, ir6=1, ialtd=0,
> &end
>
> What are the problems here? Although I have 89
> distance restrains, it seems that I have to split it
> into two 7-col files for RST files......
>
> Thanks in advance
>
> Wenyong
>
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Received on Sun Sep 16 2007 - 06:07:42 PDT
