Hi,
On Tue, 11 Sep 2007, Francesco Pietra wrote:
> Is any tutorial available as to build a complex between a protein and a small
> molecule? Such, as for example, steptavidin-biotin, where the tutorial starts
> from the complex.
>
> Specifically I am interested in joining gaff (from antechamber) to ff99SB.
I do not know of such an Amber tutorial.
See this for suggestions:
http://amber.ch.ic.ac.uk/archive/200708/0300.html
See also this thread for a continuation of these issues:
http://blur.compbio.ucsf.edu/pipermail/dock-fans/2007-September/001178.html
Scott
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun Sep 16 2007 - 06:07:37 PDT
