Dear all,
I'm facing with a problem that is, mybe a bit too challenging for my skill:
I would like to evaluate the interaction energy (binding free energy) of a
complex of the form P1 + i + P2, where P1 and P2 are proteins and i is a
metal ion. I know there is th PBSA tools to do that in AMBER
Can somebody tell me from where operatively start, maybe pointing out a
tutorial or some clear reference?
I do not belive that a "M.D. for dummies" already exixts....
Many Thanks
Edoardo
--
Dr Edoardo Saccenti
CERM Magnetic Resonance Center
University of Florence
Fiorgen Foundation
Via Luigi Sacconi n° 6
50019 Sesto Fiorentino
(FI) Italy
Tel: +39 055 4574281
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Received on Sun Sep 16 2007 - 06:07:09 PDT
