AMBER: energy minimization parameter

From: Qiang Zhong <>
Date: Wed, 29 Aug 2007 15:54:12 +0800

Dear Amber users:
           I am study the TUTORIAL A8: Loop dynamics of the HIV-1 integrase core
I cann't understand some content of file content is below:
Minimization with Cartesian restraints for the solute
 imin=1, maxcyc=200,
Group input for restrained atoms ///what meaning of this line, it is
just comment?
///what meaning of this line, it is box size?
RES 1 155

I don't know what meaning of comment line,Could somebody tell me what meaning it

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Received on Sun Sep 02 2007 - 06:07:04 PDT
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