AMBER: About amber7

From: Saiful Islam <>
Date: Tue, 3 Jul 2007 19:49:28 +0600

I am a user of amber7.I have a problem as follows:

After I have created the initial model, it is a good idea to visually
inspect the model to make sure everything looks reasonable.I have used the
command "ambpdb" to convert the topology and restart file into the pdb
$ ambpdb -p wt1mg.parm7 < wt1mg.crd > wt1mg_solvated.pdb

After this, it says- "ambpdb" command not found.
What can I do then?
Thanks for any help.
>From Bangladesh

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Received on Wed Jul 04 2007 - 06:07:32 PDT
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