AMBER: minimization not running

From: deepti nayar <>
Date: Thu, 29 Mar 2007 15:27:15 +0530


I am trying to minimize a dipeptide of phenylalanine-
dehydrophenylalanine. but it shows the following error.

[root.Bic11 exe]# sander -O -i -o phe_delphe.min.out -c
newdelphe.x -p delprmtop -r phe_delphe.min.x

  Unit 10 Error on OPEN: refc

my file is attacht here.

i have specified the required torsions in RST file.

 kindly tell me where i am going wrong.


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Received on Sun Apr 01 2007 - 06:07:24 PDT
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