Re: AMBER: poor performance of sander on a quad-core linux machine

From: David A. Case <>
Date: Tue, 13 Mar 2007 10:42:48 -0700

On Tue, Mar 13, 2007, Lillian chong wrote:

> I have no problems running two independent simulations at the
> same time using sander classic...

Others may have comments about quad core machines, but I wonder what you mean
by "sander classic"? You mention amber 9, so it's certainly worth trying
out pmemd rather than sander, unless there is some reason you can't use the


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Received on Wed Mar 14 2007 - 06:07:29 PDT
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