Re: AMBER: dihedral angle by Ptraj

From: Thomas Cheatham <>
Date: Tue, 23 Jan 2007 20:57:47 -0700 (Mountain Standard Time)

> Thanks a lot for your reply! I understand it now. But if I calculate the
> real dihereal angles one by one, it will be a very large input dihedral
> commands and output files, then do the average. Is it correct?

Yes, lot's of files and I agree tedious; to get averages of each angle,
you can add the command:

  analyze statistics all

to the ptraj input.

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Received on Wed Jan 24 2007 - 06:07:46 PST
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