Re: AMBER: Molecular dynamic issues

From: Chupakhin Vladimir <>
Date: Tue, 23 Jan 2007 17:50:56 +0300

I have the same question :)
What if we leave a water in GB model?
so we will have solution of the water.
Water with the additional Force-Field Restrains?
I am just guessing...

> On 1/23/07, Sophie Barbe <> wrote
> 2- Is it better to use a cubic or an octahedral box to simulate the
dynamic of a
> protein in solution?

The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Wed Jan 24 2007 - 06:07:38 PST
Custom Search