AMBER: How many steps should be used for a MD calculation?

From: Michel Becker <michelbeacker.web.de>
Date: Tue, 09 Jan 2007 10:12:55 +0100

Dear AMBER users,

just a small question. I often asked myself how many steps it needs that an MD calculation counts as meaningful. surely it is system dependent. I am handling with a DNA-drug complex, my timestep is 0.002.

Could you please tell me something about the number of steps that you take for compareable systems?

With best regards

Michel Beacker.
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Received on Wed Jan 10 2007 - 06:07:42 PST
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