AMBER: How to do minimization..

From: sai vikram <>
Date: Mon, 8 Jan 2007 21:00:59 +0530

 Hi all,

 It is a basic question.

I am doing simulation of a system. which is having organic solvent,
surfactant and water .

How can i do minimization?

How to treat water in the system?

Is it necessary to do with restrain, on surfactants at first and later with

How could i know the relaxation time of an organic solvent?

 Can someone please advice me here.

 Thanks in advance


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Received on Wed Jan 10 2007 - 06:07:24 PST
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