AMBER: Simulation of a charged system

From: Kijeong Kwac <pine994.naver.com>
Date: Sat, 06 Jan 2007 08:08:42 +0900

Hello, Amber users and developers:
For a simulation of a charged protein in explicit solvent using the PME, simulation without counter ions should be preferred to using counter ions?
I have read in the archive that Amber provides a uniform neutralizing plasma to make the system neutral.
Could anybody give some references about this issue?
Thank you in advance.
 
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Received on Sun Jan 07 2007 - 06:07:49 PST
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