Re: AMBER: rdparm

From: Tim Meyer <tim.mmb.pcb.ub.es>
Date: Tue, 19 Dec 2006 16:22:45 +0100

there is a program called topcut from petr kulhanek (kulhanek.chemi.muni.cz)
which can do this.

tim



venditti2.unisi.it wrote:
> Dear list,
> I have to strip out all the water hydrogens from my simulation. I did it
> for the trajectory file but I don't understand the way to delete these
> atoms in the topology file.
> I tryied using the rdparm command, but I have just found a way to strip
> the water molecules (using the stripwater option).
> Have you any suggestion?
> Many thanks in advance,
> Vincenzo
>
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Received on Wed Dec 20 2006 - 06:07:45 PST
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