AMBER: Error in sysdepend.c?

Date: Fri, 15 Dec 2006 14:44:50 -0500

Hi all,

I'm trying to compile Amber 9 on an Octane 2 SGI machine running IRIX
6.5.25f using gcc 4.0.3, binutils 2.17, and g95 0.9. I use the
following commands to compile:

1. ./configure g95
2. make serial

The compilation halts because of the following error:

cd src/leap; make install
make[2]: Entering directory
Makefile:4: warning: overriding commands for target '.c.o'
../../../config.h:86: warning: ignoring old commands for target '.c.o'
gcc -c -I/usr/X11R6/include -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-02 -o basics.o basics.c
gcc -c -I/usr/X11R6/include -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE
-02 -o sysdepend.o sysdepend.c
sysdepend.c: In function 'SysdependDirectoryList':
sysdepend.c:177: warning: passing argument 2 of 'BSDscandir' from
incompatible pointer type
sysdepend.c:186: error: dereferencing pointer to incomplete type
make[2]: *** [sysdepend.o] Error 1
make[2]: Leaving directory
make[1]: *** [install] Error 2
make[1]: Leaving directory
make: *** [serial] Error 2

Is this a bug inherent in Amber 9?

Much thanks,

John Shin

Walter Reed Army Institute of Research
Division of Molecular Pharmacology
Department of Biochemistry
503 Robert Grant Ave.
Silver Spring, MD 20910
Tel: 301-319-9054
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Received on Sun Dec 17 2006 - 06:07:21 PST
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